Read Lab: Researching Typanosoma brucei
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Read Lab Publications



Located below is a list of the publications produced by our lab, starting with the most recent:



Kafková L, Ammerman ML, Faktorová D, Fisk JC, Zimmer SL, Sobotka R, Read LK, Lukes J, Hashimi H. (2012)
Functional characterization of two paralogs that are novel RNA binding proteins influencing mitochondrial transcripts of Trypanosoma brucei.
RNA. 18(10):1846-61
                    Abstract                 PDF                 Supplemental


Foda BM, Downey KM, Fisk JC, Read LK.
Multifunctional G-Rich and RRM-Containing Domains of TbRGG2 Perform Separate yet Essential Functions in Trypanosome RNA Editing.
Eukaryot Cell. 11(9):1119-31.
                    Abstract                 PDF                 Supplemental


Zimmer SL, McEvoy SM, Menon S, Read LK (2012)
Additive and Transcript-Specific Effects of KPAP1 and TbRND Activities on 3' Non-Encoded Tail Characteristics and mRNA Stability in Trypanosoma brucei.
PLoS One. 7(5):e37639
                    Abstract                 PDF                 Supplemental 1                 Supplemental 2


Ammerman ML, Downey KM, Hashimi H, Fisk JC, Tomasello DL, Faktorová D, Kafková L, King T, Lukes J, Read LK (2012)
Architecture of the trypanosome RNA editing accessory complex, MRB1.
Nucleic Acids Res. 40(12):5637-50
                    Abstract                 PDF                 Supplemental


Madina BR, Kuppan G, Vashisht AA, Liang YH, Downey KM, Wohlschlegel JA, Ji X, Sze SH, Sacchettini JC, Read LK, Cruz-Reyes J. (2011)
Guide RNA biogenesis involves a novel RNase III family endoribonuclease in Trypanosoma brucei.
RNA. 17(10):1821-3
                    Abstract                 PDF                 Supplemental 1                 Supplemental 2                 Supplemental 3


Fisk JC, Read LK. (2011)
Protein arginine methylation in parasitic protozoa.
Eukaryot Cell. 10(8):1013-22
                    Abstract                 PDF


Ammerman ML, Hashimi H, Novotná L, Cicová Z, McEvoy SM, Lukes J, Read LK. (2011)
MRB3010 is a core component of the MRB1 complex that facilitates an early step of the kinetoplastid RNA editing process.
RNA 17(5):865-77
                    Abstract                 PDF                 Supplemental 1                 Supplemental 2


Read LK, Zimmer SL, Ammerman ML. (2011)
Marked for translation: long A/U tails as an interface between completion of RNA editing and ribosome recruitment.
Mol Cell 42(1):106-17
                    Abstract                 PDF


Zimmer SL, McEvoy SM, Li J, Qu J, Read LK. (2011)
A novel member of the RNase D exoribonuclease family functions in mitochondrial guide RNA metabolism in Trypanosoma brucei.
J Biol Chem. 286(12):10329-340
                    Abstract                 PDF                 Supplemental


Ammerman ML, Presnyak V, Fisk JC, Foda BM, Read LK. (2010)
TbRGG2 facilitates kinetoplastid RNA editing initiation and progression past intrinsic pause sites.
RNA. 16:2239-2251
                    Abstract                 PDF                 Supplemental 1                 Supplemental 2                 Supplemental 3                 Supplemental 4


Fisk JC, Zurita-Lopez C, Sayegh J, Tomasello DL, Clarke SG, Read LK. (2010)
TbPRMT6 is a type I protein arginine methyltransferase that contributes to cytokinesis in Trypanosoma brucei.
Eukaryot Cell. 9(6):866-77
                    Abstract                 PDF                 Supplemental


Sprehe M, Fisk JC, McEvoy SM, Read LK, Schumacher MA. (2010)
Structure of the T. brucei p22 protein, a cytochrome oxidase subunit II (COII) specific RNA editing accessory factor.
J Biol Chem. 285(24):18899-908
                    Abstract                 PDF                 Supplemental


Fisk JC, Presnyak V, Ammerman ML, Read LK. (2009)
Distinct and overlapping functions of MRP1/2 and RBP16 in mitochondrial RNA metabolism.
Mol Cell Biol. 29(19):5214-25
                    Abstract                 PDF


Mattiacio JL, Read LK. (2009)
Evidence for a degradosome-like complex in the mitochondria of Trypanosoma brucei.
FEBS Lett. 583(14):2333-8
                    Abstract                 PDF


Fisk JC, Sayegh J, Zurita-Lopez C, Menon S, Presnyak V, Clarke SG, Read LK. (2009)
A type III protein arginine methyltransferase from the protozoan parasite Trypanosoma brucei.
J Biol Chem. 284(17):11590-600
                    Abstract                 PDF


Fisk JC, Ammerman ML, Presnyak V, Read LK. (2008)
TbRGG2, an essential RNA editing accessory factor in two Trypanosoma brucei life cycle stages.
J Biol Chem. 283(34):23016-25
                    Abstract                 PDF


Ammerman ML, Fisk JC, Read LK. (2008)
gRNA/pre-mRNA annealing and RNA chaperone activities of RBP16.
RNA. 14(6):1069-80
                    Abstract                 PDF


Mattiacio JL, Read LK. (2008)
Roles for TbDSS-1 in RNA surveillance and decay of maturation by-products from the 12S rRNA locus.
Nucleic Acids Res. 36(1):319-29
                    Abstract                 PDF


Pelletier M, Read LK, Aphasizhev R. (2007)
Isolation of RNA binding proteins involved in insertion/deletion editing.
Methods Enzymol. 424:75-105
                    Abstract                 PDF


Pusnik M, Small I, Read LK, Fabbro T, Schneider A. (2007)
Pentatricopeptide repeat proteins in Trypanosoma brucei function in mitochondrial ribosomes.
Mol Cell Biol. 27(19):6876-88
                    Abstract                 PDF


Pasternack DA, Sayegh J, Clarke S, Read LK. (2007)
Evolutionarily divergent type II protein arginine methyltransferase in Trypanosoma brucei.
Eukaryot Cell. 6(9):1665-81
                    Abstract                 PDF


Kao CY, Read LK. (2007)
Targeted depletion of a mitochondrial nucleotidyltransferase suggests the presence of multiple enzymes that polymerize mRNA 3' tails in Trypanosoma brucei mitochondria.
Mol Biochem Parasitol. 154(2):158-69
                    Abstract                 PDF


Duan P, Xu Y, Birkaya B, Myers J, Pelletier M, Read LK, Guarnaccia C, Pongor S, Denman RB, Aletta JM. (2007)
Generation of polyclonal antiserum for the detection of methylarginine proteins.
J Immunol Methods. 320(1-2):132-42
                    Abstract                 PDF


Goulah CC, Read LK. (2007)
Differential effects of arginine methylation on RBP16 mRNA binding, guide RNA (gRNA) binding, and gRNA-containing ribonucleoprotein complex (gRNP) formation. (2006)
J Biol Chem. 282(10):7181-90
                    Abstract                 PDF


Goulah CC, Pelletier M, Read LK. (2006)
Arginine methylation regulates mitochondrial gene expression in Trypanosoma brucei through multiple effector proteins.
RNA. 12(8):1545-55
                    Abstract                 PDF


Miller MM, Halbig K, Cruz-Reyes J, Read LK. (2006)
RBP16 stimulates trypanosome RNA editing in vitro at an early step in the editing reaction.
RNA. 12(7):1292-303
                    Abstract                 PDF


Ryan CM, Kao CY, Sleve DA, Read LK. (2006)
Biphasic decay of guide RNAs in Trypanosoma brucei.
Mol Biochem Parasitol. 146(1):68-77
                    Abstract                 PDF


Pelletier M, Pasternack DA, Read LK. (2005)
In vitro and in vivo analysis of the major type I protein arginine methyltransferase from Trypanosoma brucei.
Mol Biochem Parasitol. 144(2):206-17
                    Abstract                 PDF


Ryan CM, Read LK. (2005)
UTP-dependent turnover of Trypanosoma brucei mitochondrial mRNA requires UTP polymerization and involves the RET1 TUTase.
RNA. 11(5):763-73
                    Abstract                 PDF


Kao CY, Read LK. (2005)
Opposing effects of polyadenylation on the stability of edited and unedited mitochondrial RNAs in Trypanosoma brucei.
Mol Cell Biol. 25(5):1634-44
                    Abstract                 PDF


Penschow JL, Sleve DA, Ryan CM, Read LK. (2004)
TbDSS-1, an essential Trypanosoma brucei exoribonuclease homolog that has pleiotropic effects on mitochondrial RNA metabolism.
Eukaryot Cell. 3(5):1206-16
                    Abstract                 PDF


Miller MM, Read LK. (2003)
Trypanosoma brucei: functions of RBP16 cold shock and RGG domains in macromolecular interactions.
Exp Parasitol. 105(2):140-8
                    Abstract                 PDF


Ryan CM, Militello KT, Read LK. (2003)
Polyadenylation regulates the stability of Trypanosoma brucei mitochondrial RNAs.
J Biol Chem. 278(35):32753-62
                    Abstract                 PDF


Pelletier M, Read LK. (2003)
RBP16 is a multifunctional gene regulatory protein involved in editing and stabilization of specific mitochondrial mRNAs in Trypanosoma brucei.
RNA. 9(4):457-68
                    Abstract                 PDF


Hayman, M.L., M.M. Miller, D.M. Chandler, C.C. Goulah, and L.K. Read. (2001)
The trypanosome homolog of human p32 interacts with RBP16 and stimulates its gRNA binding activity.
Nucl. Acids Res. 29(24):5216-5225
                    Abstract                 PDF


Pelletier, M., Y. Xu, X. Wang, S. Zahariev, S. Pongor, J.M. Aletta, and L.K. Read. (2001)
Arginine methylation of a mitochondrial guide RNA binding protein from Trypanosoma brucei.
Mol. Biochem. Parasitol. 118(1):49-59
                    Abstract                 PDF


Militello, K.T., M.L. Hayman, and L.K. Read. (2000)
Transcriptional and post-transcriptional in organello labeling of Trypanosoma brucei mitochondrial RNA.
Int. J. Parasitol. 30:643-647
                    Abstract                 PDF


Militello, K.T. and L.K. Read. (2000)
UTP-dependent and UTP-independent pathways of mRNA turnover in Trypanosoma brucei mitochondria.
Mol. Cell. Biol. 20(7):2308-2316
                    Abstract                 PDF


Pelletier, M., M.M. Miller, and L.K. Read. (2000)
RNA binding properties of the mitochondrial Y-box protein RBP16.
Nucl. Acids Res. 28(5):1266-1275
                    Abstract                 PDF


Read, L.K., K.T. Militello, and G.E. Nerantzakis. (1999)
Cloning and characterisation of a cDNA encoding the Trypanosoma brucei ribosomal protein L24.
Int. J. Parasitol. 29(4):601-605
                    Abstract                 PDF


Hayman, M.L. and L.K. Read. (1999)
Trypanosoma brucei RBP16 is a mitochondrial Y-box family protein with guide RNA binding activity.
J. Biol. Chem. 274(17):12067-12074
                    Abstract                 PDF


Militello, K.T. and L.K. Read. (1999)
Coordination of kRNA editing and polyadenylation in Trypanosoma brucei mitochondria: Complete editing is not required for long poly(A) tract addition.
Nucl. Acids Res. 27(5):1377-1385
                    Abstract                 PDF


Hotchkiss, T.L., G.E. Nerantzakis, S.C. Dills, L. Shang, and L.K. Read. (1999)
Trypanosoma brucei poly(A) binding protein I cloning, expression, and binding to 5' untranslated region sequence elements.
Mol. Biochem. Parasitol. 98(1):117-129
                    Abstract                 PDF



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