38. J1. Xie, Y., Zhang, S., Wu, D., Yao, Y., Cho, J., Lu, J., Zhu, H., Wang, Y., Zhang, Y., and Zhu, W. (2024) The changes of oxygen extraction fraction in different types of lesions in relapsing-remitting multiple sclerosis: A cross-sectional and longitudinal study. Neurol Sci. PMID: 38492126

37. Cho, J., Zhang, J., Spincemaille, P., Zhang, H., Nguyen T.D., Zhang, S., Gupta A., Wang, Y. (2024) Multi-echo complex quantitative susceptibility mapping and quantitative blood oxygen level-dependent magnitude (mcQSM+qBOLD or mcQQ) for oxygen extraction fraction (OEF) mapping. Bioengineering (11) 131

36. Yan, Y., Lu, J., Li, Y., Cho, J., Zhang, S., Zhu, W., Wang, Y. (2023) Spatiotemporal patterns of brain iron-oxygen metabolism in patients with Parkinson's disease. Eur Radiol (0) 1-10

35. Van Grinsven, E.E., De Leeuw, J., Siero, J.C.W., Verhoeff, J.J.C., Van Zandvoort, M.J.E., Cho, J., Philippens, M.E.P., and Bhogal, A.A. (2023) Evaluating Physiological MRI Paramters in Patients with Brain Metastases Undergoing Stereotactic Radiosurgery - A Preliminary Anaysis and Case Report. Cancers (15) 4298

34. Biondetti, E., Cho, J.,and Lee, Y.(2023) Cerebral oxygen metabolism from MRI susceptibility. Neuroimage (276) ID 120189

33. Zhuang, L., Cho, J., Chiang, G.C.Y, Kovanlikaya, I., Heier L.A., Dyke J.P., and Wang, Y. (2023) Cerebral oxygen extraction fraction declines with ventricular enlargement in patients with normal pressure hydrocephalus. Clin Imaging (97) 22-27

32. Zhang, Q., Sui, C., Cho, J., Yang, L., Chen, T., Guo, B., Gillen, K.M., Li, J., Guo, L., and Wang, Y. (2023) Assessing cerebral oxygen metabolism changes in patients with preeclampsia using voxel-based morphometry of oxygen extraction fraction maps in magnetic resonance imaging. Korean J Radiol (24) 324-337

31. Yang, L., Cho, J., Chen, T., Gillen, K.M., Li, J., Zhang, Q., Guo, L., and Wang, Y. (2022) Oxygen extraction fraction (OEF) assesses cerebral oxygen metabolism of deep gray matter in patients with pre-eclampsia. Eur Radiol (30) 6058-6069

30. Chiang, G.C., Cho, J.§, Dyke, J., Zhang, H., Zhang, Q., Tokov, M., Nguyen T., Kovanlikaya, I., Amoashiy, M., Leon, M.D., Wang, Y. (2022) Brain oxygen extraction and neural tissue susceptibility are associated with cognitive impairment in older individuals. J NueroImaging (32) 697-709

29. Kim, J., Ngyuyen, T., Zhang, J., Gauthier, S., Marcille, M., Zhang, H., Cho, J., Spincemaille, P., Wang, Y. (2022). Sub-second Accurate Myeline Water Fraction Reconstruction from FAST-T2 Data with 3D UNET. Magn Reson Med (87) 2979-2988

28. Cho, J., Zhang, J., Spincemaille, P., Zhang H., Hubertus, S., Wen, Y., Jafari, R., Zhang, S., Nguyen T.D., Gupta, A., Wang, Y. (2022). QQ-NET-using deep learning to solve Quantitative Susceptibility Mapping and Quantitative Blood Oxygen Level Dependent magnitude (QSM+qBOLD or QQ) based Oxygen Extraction Fraction (OEF) mapping. Magn Reson Med (87) 1093-1637.

27. Li, J., Huang, W., Luo, X., Wen, Y., Cho, J., Kovanlikaya, I., Gauthier S., Nguyen, T.D., Spincemaille, P., and Wang, Y. (2022). The Central Vein Sign in Multiple Sclerosis Lesions: Susceptibility Relaxation Optimization from a routine MRI Multiecho Gradient Echo Sequence. J NeuroImaging (32) 48-56.

26. Cho, J., Nguyen, T., Huang, W., Sweeney, E., Luo, X., Kovanlikaya, I., Zhang, S., Gillen, K., Spincemaille, P., Guta, A., Gauthier, S., and Wang, Y. (2021). Brain oxygen extraction fraction mapping in patients with multiple sclerosis. J Cereb Blood Flow Metab (42) 338-348.

25. Cho, H., Lee, H., Gong, Y., Kim, Y., Cho, J., and Cho., H. (2021). Quantitative susceptibility mapping (QSM) and R1 measurement: determination of the myelin volume fraction in the aging ex vivo rat corpus callosum. NMR Biomed e4645

24. Nanxi, S., Zhang, S., Cho, J., Li, S., Zhang, J., Xie, Y., Wang, Y., Wenzhen, Z. (2021). Application of Cluster Analysis of Time Evolution for MRI Imaging-derived Oxygen Extraction Fraction Mapping: a promising strategy for the genetic profile prediction and grading of glioma. Front Neurosci (15) Article 736891

23. Wu, D., Zhou, Y., Cho, J., Li, S., Qin, Y., Zhang, G., Yan, S., Xie, Y., Zhang, S., Zhu, W., and Wang, Y. (2021). The Spatiotemporal Evolution of MRI-Derived Oxygen Extraction Fraction and Perfusion in Ischemic Stroke. Front Neurosci Article 716031

22. Cho, J., Spincemaille, P., Nguyen T.D., Gupta, A., and Wang, Y. (2021). Temporal clustering, tissue composition, and total variation for mapping oxygen extraction fraction using QSM and quantitative BOLD. Magn Reson Med (86) 2635-2646.

21. Wen, Y., Spincemaille, P., Nguyen, T., Cho, J., Kovanlikaya, I., Anderson, J., Wu, G., Yang, B., Fung, M., Li, K., Kelley, D., Benhamo, N., and Wang, Y. (2021). Multiecho complex total field inversion method (mcTFI) for improved signal modelling in quantitative susceptibility mapping. Magn Reson Med (84) 2165-2178.

20. Jafari, R., Spincemaille, P., Zhang, J., Nguyen, T.D., Luo, X., Cho, J., Margolis, D., Prince., MR, and Wang, Y. (2021). Deep neural network for water/fast separation: Supervised training, unsupervised training, and no training. Magn Reson Med (85) 2263-2277.

19. Cho, J., Ma, Y., Spincemaille, P., Pike GB, and Wang, Y. (2021). Cerebral oxygen extraction fraction: Comparison of dual-gas challenge BOLD with CBF and challenge-free gradient echo QSM+qBOLD. Magn Reson Med (85) 953-961.

18. Ma, Y., Sun, H., Cho, J., Mazerolle, E. L., Wang, Y., and Pike, B. (2020). Cerebral OEF quantification: A comparison study between quantitative susceptibility mapping and dual-gas calibrated BOLD imaging. Magn Reson Med (83) 68-82.

17. Cho, J., Lee, J., An, H., Goyal, M.S., Su, Y., and Wang, Y. (2020). Cerebral oxygen extraction fraction (OEF): Comparison of challenge-free gradient echo QSM+qBOLD (QQ) with 15O PET in healthy adults. J Cereb Blood Flow Metab (41) 1658-1668.

16. Zhang, S., Cho, J., Nguyen T.D., Spincemaille, P., Gupta, A., Zhu, W., and Wang, Y. (2020) Initial Experience of Challenge-Free MRI-based Oxygen Extraction Fraction Mapping of Ischemic Stroke at Various Stages: Comparison With Perfusion and Diffusion Mapping. Front Neurosci Article 535441.

15. Ma, Y., Mazerolle, E.L., Cho, J., Sun, H., Wang, Y., and Pike, G.B. Quantification of brain oxygen extraction fraction using QSM and a hyperoxic challenge. Magn Reason Med (84) 3271-3285

14. Eskreis-Winkler, S., Simon, K., Reichman, M., Spincemaille, P., Nguyen, T.D., Kee, Y., Cho, J., Christos, P.J., Drotman, M., Prince, M.R., Morris, E.A., and Wang, Y. (2019). Dipole modeling of multispectral signal for detecting metallic biopsy markers during MRI-guided breast biopsy: a pilot study. Magn Reson Med (83) 1380-1389.

13. Cho, J., Zhang, S., Kee, Y., Spincemaille, P., Nguyen, T.D., Hubertus, S., Gupta, A., and Wang, Y. (2020). Cluster analysis of time evolution (CAT) for quantitative susceptibility mapping (QSM) and quantitative blood oxygen level-dependent magnitude (qBOLD)-based oxygen extraction fraction (OEF) and cerebral metabolic rate of oxygen (CMRO2). Magn Reson Med (83) 844-857.

12. Hubertus, S., Thomas, S., Cho, J., Zhang, S., Wang, Y., and Schad, L.R. (2019). Using an artificial neural network for fast mapping of the oxygen extraction fraction with combined QSM and quantitative BOLD. Magn Reson Med (82) 2199-2211.

11. Hubertus, S., Thomas, S., Cho, J., Zhang, S., Wang, Y., and Schad, L.R. (2019). Comparison of gradient echo and gradient echo sampling of spin echo sequence for the quantification of the oxygen extraction fraction from a combined quantitative susceptibility mapping and quantitative BOLD (QSM+qBOLD) approach. Magn Reson Med (82) 1491-1503.

10. Cho, J., Zhou, D., Kee, Y., Spincemaille, P., and Wang, Y. (2019). Quantitative susceptibility mapping of magnetic quadrupole moments. Concepts in MR Part A. Article ID 7174937.

9. Cho J., Kee, Y., Spincemaille, P., Nguyen, T.D., Zhang, J., Gupta, A., Zhang, S., and Wang, Y. (2018). Cerebral metabolic rate of oxygen (CMRO2) mapping by combining quantitative susceptibility mapping (QSM) and quantitative blood oxygenation level-dependent imaging (qBOLD). Magn Reson Med (80) 1595-1604.

8. Kee, Y., Cho, J., Deh, K., Liu, Z., Spincemaille, P., and Wang, Y. (2018). Coherence enhancement in quantitative susceptibility mapping by means of anisotropic weighting in morphology enabled dipole inversion. Magn Reson Med (79) 1172-1180.

7. Zhang, J., Cho, J., Zhou, D., Nguyen, T.D., Spincemaille, P., Gupta, A., and Wang, Y. (2018). Quantitative susceptibility mapping-based cerebral metabolic rate of oxygen mapping with minimum local variance. Magn Reson Med (79) 172-179.

6. Kee, Y., Liu, Z., Zhou, L., Dimov, A., Cho, J., de Rochefort, L., Seo, J.K., and Wang, Y. (2017). Quantitative susceptibility mapping (QSM) algorithms: mathematical rationale and computational implementations. IEEE TRANS BIO ENGIN (64) 2531-2545.

5. Zhou, D., Cho, J., Zhang, J., Spincemaille, P., and Wang, Y. (2017). Susceptibility underestimation in a high-susceptibility phantom: dependence on imaging resolution, magnitude contrast, and other parameters. Magn Reson Med (78),1080-1086

4. Jung, H., Jin, S., Cho, J., Han, S., Lee, D., and Cho, H. (2016). UTE-ΔR2- ΔR2* combined MR whole brain angiogram using dual-contrast superparamagnetic iron oxide nanoparticles. NMR in Biomedicine 29 (6), 690-701.

3. Han, S., Cho, J., Jung, H., Suh, J., Kim, J., Kim, Y., Cho, G., and Cho, H. (2015). Robust MR assessment of cerebral blood volume and mean vessel size using SPION-enhanced ultrashort echo acquisition. NeuroImage (112), 382-389.

2. Jung, H., Park, B., Lee, C., Cho, J., Suh, J., Park, J., Kim, Y., Kim, J., Cho, G., and Cho, H. (2014). Dual MRI T1 and T2* contrast with size-controlled iron oxide nanoparticles. Nanomedicine: Nanotechnology, Biology, and Medicine (10), 1679-1689.

1. Kim, H., Cho, J.§, Kim, Y., Song, Y., Chun, S., Suh, J., Kim, J., Ryu, Y., Choi, S., Cho, H., and Cho, G. (2014). Response of the Primary Auditory and Non-Auditory Cortices to Acoustic Stimulation: A Manganese-Enhanced MRI Study. PLoS One (9): e90427