A Unified Framework for Mapping Quantitative Trait Loci in Bivalent Tetraploids Using Single-dose Restriction Fragments

Step 1: Prepare Data for Calculation

Markers Place:

Markers Traits (no comments, no missing) Delimiter: space tab 2 2 2 1 1 1 101 2 2 2 1 1 1 43 1 1 1 1 1 1 36 2 2 2 2 2 2 88 1 1 1 1 1 1 56 2 2 2 2 2 2 45 1 1 1 2 2 2 54 1 2 2 1 1 1 88 2 2 2 2 2 1 74 2 2 2 2 2 1 104 2 1 1 2 2 2 55 2 2 2 1 1 1 81 2 1 1 2 1 1 48 1 1 1 1 1 1 55 2 2 2 2 2 2 58 2 2 2 2 2 2 67 2 2 2 2 1 1 58 1 2 2 2 2 2 70 1 1 1 1 1 1 73 1 1 1 2 2 1 44 2 2 2 1 1 2 56 2 2 2 1 1 1 42 1 1 1 1 1 1 39 1 2 2 1 1 1 63 2 2 2 1 1 1 62 1 1 1 1 2 2 71 2 2 2 2 2 2 104 1 1 1 1 1 1 85 2 2 2 2 2 2 99 1 1 1 1 1 2 80 2 1 1 2 1 1 100 1 1 2 1 1 2 55 2 2 2 1 1 1 49 1 1 1 1 1 1 42 2 2 1 2 2 2 53 1 1 2 2 2 2 50 2 2 1 2 2 1 51 2 1 2 2 2 1 49 1 1 1 2 1 1 59 1 1 2 2 1 1 41 1 2 1 1 2 2 54 1 1 1 2 2 2 55 1 1 1 1 1 1 49 1 2 2 2 2 2 37 2 1 1 1 2 2 78 1 1 1 1 1 1 78 2 2 2 1 1 1 58 2 2 1 1 1 1 108 1 1 1 1 1 1 57 1 2 2 2 2 2 74 1 1 1 1 1 1 45 1 1 1 2 2 1 50 2 1 1 2 2 1 52 2 2 2 1 1 1 91 1 1 1 1 2 2 48 1 2 2 2 2 2 99 2 2 2 1 1 1 83 2 2 2 2 1 1 65 2 2 2 2 2 2 82 1 2 2 1 1 1 83 1 2 2 2 2 2 40 2 2 2 1 1 1 80 2 2 2 2 2 1 91 2 2 2 2 1 1 64 1 1 1 1 1 1 47 2 2 2 1 1 1 78 1 1 1 1 1 1 39 2 2 2 2 2 2 56 1 1 1 1 1 1 59 2 1 1 2 2 1 56 2 2 2 2 2 2 60 1 1 1 1 1 2 67 1 1 1 1 1 1 63 1 1 1 1 1 1 54 1 1 1 1 1 2 54 2 2 2 1 1 1 77 2 2 2 1 1 1 73 1 1 1 1 1 1 61 1 1 1 1 1 1 55 1 1 1 1 1 1 61 2 2 2 1 1 1 139 1 1 1 1 2 2 44 2 2 2 2 2 1 78 2 2 2 1 1 1 44 1 1 1 1 2 2 51 1 1 1 1 1 1 61 2 1 1 1 2 2 53 1 1 1 1 1 1 49 2 2 2 2 1 1 81 2 1 1 1 1 1 57 1 1 1 2 2 1 67 1 1 1 2 2 2 43 2 2 2 1 1 1 81 1 1 1 1 1 1 28 1 1 1 1 1 1 68 1 1 1 2 2 2 45 2 2 2 2 2 1 63 2 2 2 2 2 2 92

Note: first column is No. of observations, followed by markers and traits

Step 2: Calculation: Search Step by cM

Details of Results:

Reference:

Ma CX, Casella G, Shen ZJ, Osborn TC, and Wu RL

A Unified Framework for Mapping Quantitative Trait Loci in Bivalent Tetraploids Using Single-dose Restriction Fragments: A Case Study from Alfalfa , Genome Research 12 (12), 1974-1981, December 2002 (Full Text)